Think of the master server as a director, a log keeper, and if you want a data mover. The media server merely receives data from clients that are told to use it for its backup. It too keeps track of the data and tapes it has used in its backups.
For your second question, that depends on how you set up the following:
Multiplexing on the backup schedule
max drives per policy
max concurrent drives per storage unit
max multiplexing per drive in the storage unit
For instance we have:
16 Multiplexing per backup schedule
no max drives per policy
2 max concurrent drives per storage unit
8 max multiplexing per drive in the storage unit
and we use in line tape copy allowing us to create onsite and offsite storage simultaneously. Our Unix backups can go to one of two storage units in a storage group. Once one fills up with media multiplexing, the next one in the storage group takes the next 8.
Troy