Hello,
What files are getting skipped?
Are the WINS database files getting skipped during the backup.?
If yes, then this is normal and can be ignored. The contents of WINNT folder are backed up during backup of "System State".
Please refer to the following link :
http://www.microsoft.com/windows2000/en/server/help/default.aspurl=/windows2000/en/server/help/sag_WINS_und_Database.htm?id=2266
These files are a part of the %systemroot%\system32\wins folder, so you may deselect them from the backup selections while taking a full backup. These files are in use as their dependency services are running.
You may like to refer to the following Microsoft Knowledge base article to backup the WINS Database. Which explains how to backup and restore Windows 2000/ Windows NT WINS database.
http://support.microsoft.com/default.aspx?scid=kb;en-us;244810
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